Page 111 - CSIR-IGIB Annual Report 2020-21
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COX-2 downregulation in response to valproic acid
            Epilepsy is a chronic neurological disease affecting   COX-2 inhibitors in adjunction to prescribed AEDs
            1% of  the world population. Antiepileptic  drug    in large-sample, randomized, controlled trials with
            (AED) therapy is the initial choice for treatment.   a parallel assessment of  plasma PGE2 levels  to
            Despite the  market  availability of various AEDs,   substantiate  the potential adjunctive application
            nearly 40-50% of the individuals fail to respond to   of COX-2 inhibitors for epilepsy treatment.
            first AED monotherapy  with 30% patients not
            responding to even  multidrug  therapy. The vast    PGx panels to predict antiepileptic drug response
            heterogeneity associated with  epilepsy and         Every individual responds differently to different
            multifactorial nature of the disease involving both   drugs. These differences in drug response are
            genetic and environmental factors have resulted     primarily attributable to individual genetic
            in inconsistencies in genetic findings predictive of   differences, called pharmacogenomic (PGx)
            AED response.  This entails the need to adopt an    variants. Our group aims to comprehend the genes
            approach   different  from   pharmacogenetic        involved in drug response like the  metabolising
            approach in  determining  AED response. Our lab     enzymes, transporters and drug  targets and
            conducted a microarray-based gene  expression       identify its  PGx variants to formulate clinically
            profiling study in blood samples of patients with   actionable  pharmacogenetic tests. Furthermore,
            epilepsy (PWE).  The  project firstly aimed to      the technology assessment based on predictive
            investigate  the   heterogeneity   in  blood        value of each test and cost-effectiveness of testing
            transcriptomic profiles of patients with different   patients for an entire panel of relevant markers at
            epilepsy etiologies.  Comparing the  profiles of    once will be evaluated.    The focus is on highly
            patients with different epilepsy subtypes showed    curated epilepsy patients and control samples, in
            patients with idiopathic epilepsy to have the most   which a total of 1063 epilepsy patient samples and
            distinct and differential profiles compared to that   498 age-matched healthy controls were recruited
            with cryptogenic and symptomatic epilepsies. In     in earlier research projects. For each of the
            the second part of the study, a comparison was      recruited    cohort,      genotype-phenotype
            made between the peripheral blood gene              correlations  were   estimated   to   identify
            expression  profiles of patients with idiopathic    statistically significant genetic variants. To confirm
            epilepsy responding and non-responding to           the findings  from the  previous studies, in  this
            valproic acid (VA), a broad-spectrum AED to look    project, we have performed a large-scale
            for genes associated with variable response. The    validation study in the complete cohort. Here, we
            proinflammatory gene, PTGS2 (encoding COX-2)        evaluated the correlation of the genotype marker
            was found to  be  downregulated in PWE              with a specific drug phenotype  to  assess its
            responding  efficaciously to VA. VA responder       reproducibility/replicability,  validated  the
            patients also showed lower plasma levels of PGE2    statistical  models and finally determined the
            (major prostaglandin synthesized by COX-2).         credibility  of the genetic  marker to be
            Functional studies were  carried out in human       recommended as a genetic test for clinical practice
            cerebral   microvascular  endothelial   cells,      by determining the strength of the association.
            hCMEC/D3 to validate the effect of VA on the        Genetic markers  like HLA-A*31:01:02, HLA-
            expression  and   activity  of  COX-2,   EP1        B*15:02:01   are   primary  determinant    of
            (prostaglandin  receptor)  and   drug  efflux       carbamazepine  induced hypersensitivity and
            transporter, P-glycoprotein. The results suggested   rs113994095 (POLG), rs113994097 (POLG),
            that  VA downregulates COX-2 to  suppress  P-       rs1047891 (CPS1) for  valproic acid induced
            glycoprotein  expression. The findings of the       adverse   effects  like   liver  injury  and
            project provided insights in identifying  the       hyperammonemia. Likewise, CYP2C9*2 and *3 for
            markers of  VA response and suggested  COX-2        phenytoin metabolism, and CYP2C19*2 and *3 for
            inhibition as a potential strategy to increase AED   poor metabolism of diazepam, clobazam,
            efficacy.  Future  work  anticipates the  effect  of   lacosamide metabolism are significant outcomes




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