Page 74 - CSIR-IGIB Annual Report 2020-21

Publications

Integrated genomic view of SARS-CoV-2 in India. Kumar P, Pandey R, Sharma P, Dhar MS, A V, Uppili B, Vashisht H,
Wadhwa S, Tyagi N, Fatihi S, Sharma U, Singh P, Lall H, Datta M, Gupta P, Saini N, Tewari A, Nandi B, Kumar D, Bag
S, Gahlot D, Rathore S, Jatana N, Jaiswal V, Gogia H, Madan P, Singh S, Singh P, Dash D, Bala M, Kabra S, Singh S,
Mukerji M, Thukral L, Faruq M, Agrawal A, Rakshit P. Wellcome Open Res. 2020 Aug 3;5:184.

Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition) Autophagy. 2021
Jan;17(1):1-382.

Clinical, serological, whole genome sequence analyses to confirm SARS-CoV-2 reinfection in patients from Mumbai,
India. Shastri J, Parikh S, Agrawal S, Chatterjee N, Pathak M, Chaudhary S, Sharma C, Kanakan A, A V, Srinivasa
Vasudevan J, Maurya R, Fatihi S, Thukral L, Agrawal A, Pinto L, Pandey R, Sunil S. Front Med (Lausanne). 2021 Mar
9;8:631769.

Preprints
Genomic characterization and epidemiology of an emerging SARS-CoV-2 variant in Delhi, India Mahesh S Dhar,
Robin Marwal, VS Radhakrishnan, Kalaiarasan Ponnusamy, Bani Jolly, Rahul C. Bhoyar, Saman Fatihi, Meena Datta,
Priyanka Singh, Uma Sharma, Rajat Ujjainia, Salwa Naushin, Nitin Bhateja, Mohit Kumar Divakar, Viren Sardana,
Manoj K Singh, Mohamed Imran, Vigneshwar Senthivel, Ranjeet Maurya, Neha Jha, Priyanka Mehta, Mercy
Rophina, VR Arvinden, Urmila Chaudhary, Lipi Thukral, Rajesh Pandey, Debasis Dash, Mohammed Faruq, Hemlata
Lall, Hema Gogia, Preeti Madan, Sanket Kulkarni, Himanshu Chauhan, Shantanu Sengupta, Sandhya Kabra, The
Indian SARS-CoV-2 Genomics Consortium (INSACOG), Sujeet K Singh, Anurag Agrawal, Partha Rakshit medRxiv
2021.06.02.21258076

A rigorous framework for detecting SARS-CoV-2 spike protein mutational ensemble from genomic and structural
features Saman Fatihi, Surabhi Rathore, Ankit Pathak, Deepanshi Gahlot, Mitali Mukerji, Nidhi Jatana, Lipi Thukral
bioRxiv 2021.02.17.431625

Potential role of host-mediated RNA editing in intra-host variability of SARS-CoV-2 genomes Ankit K. Pathak, Saman
Fatihi, Tahseen Abbas, Bharathram Uppili, Gyan Prakash Mishra, Arup Ghosh, Sofia Banu, Rahul C. Bhoyar, Abhinav
Jain, Mohit Kumar Divakar, Mohamed Imran, Mohammed Faruq, Divya Tej Sowpati, Sunil K. Raghav, Lipi Thukral,
Mitali Mukerji bioRxiv 2020.12.09.417519

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