Page 77 - The Welfare of Cattle
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54                                                        the WeLfare of CattLe


            including goats, rabbits, and chickens, GE fluorescent fish for aquarium purposes, and also some
            trials using GE insects for pest control applications.



                            aNIMaL WeLFare aSPeCtS OF GeNe eDItING

               Genome or gene editing refers to the use of site-directed nucleases to precisely introduce a
            double-stranded break (DSB) at a predetermined location in the genome. The cell can repair that
            DSB in one of two ways—nonhomologous end joining (NHEJ) or homologous-directed repair
            (HDR) using a nucleic-acid template that includes the sequences homologous to either side of the
            DSB. The outcomes of these repair processes result in random mutations or precise gene edits,
            respectively (Figure 7.2).
               As the name “gene editing” suggests, HDR can be employed to precisely add, delete, or replace
            letters in the genetic code at the location of the break by providing the appropriate template nucleic
            acid. In the case of NHEJ, although the location of the cut site is very precise, the exact change that
            occurs when the DNA is repaired is random so a number of different outcomes representing minor
            sequence insertions (ins) or deletions (del), termed indels, are possible.
               Genome-editing technologies enable breeders to efficiently turn off a gene through NHEJ
            or precisely introduce specific allelic variants. This introduction could be as simple as a single-
            base-pair change or could conceptually involve entire genes or transgenes, as dictated by the HDR
              template nucleic-acid sequence, that breeders would like to introduce into their target population
            using editing.
               Gene editing has many potential animal welfare applications. For example, it can be used to
              correct diseases and disorders that have a genetic basis by altering the error that resulted in the dis-
            ease phenotype. It could also be used to change a less desirable allele of a gene to a more desirable





                                              Nuclease-induced
                                              double-strand break
                                           NHEJ


                      Deletions
                                                                            Donor
                                                                            template

                     Insertions
                                                                              HDR
                                    Variable length
                                       indels



                                                        Precise insertion or modification


            Figure 7.2   nuclease-induced double-strand breaks can be repaired by nonhomologous end joining (nheJ)
                     or homology-directed repair (hdr) pathways. Imprecise  nheJ-mediated repair can produce
                       insertion and/or deletion mutations of variable length at the site of the double-strand break. hdr-
                     mediated repair can introduce precise point mutations or insertions from a single-stranded or
                     double-stranded dna donor template. Image from sander Jd, Joung JK. CrIsPr-Cas systems
                     for editing, regulating and targeting genomes. Nat Biotech 2014; 32:347–355.
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