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A28    SCIENCE
                       Monday 23 July 2018

            Gene tests can provide health clues -- and needless worry



            By MALCOLM RITTER                                                                      code is like a text with 3 bil-  in her healthy husband, "a
            AP Science Writer                                                                      lion  letters.  Some  of  those  lot  of  stress  kind  of  eased
            NEW YORK (AP) — Last year,                                                             letters spell words — genes  off."
            Katie  Burns  got  a  phone                                                            —  that  carry  out  specific  And  in  October,  her  son
            call  that  shows  what  can                                                           jobs.  If  a  gene  has  one  or  was born without any trace
            happen in medicine when                                                                more letters that aren't the  of the disease.
            information  runs  ahead  of                                                           ones  found  in  the  generic  So  how  should  a  person
            knowledge.                                                                             "spelling"  of  human  DNA,  react  to  a  VUS?  Genetic
            Burns  learned  that  a  ge-                                                           they are called variants.    counselors say it should be
            netic  test  of  her  fetus  had                                                       Some  variants  lead  to  dis-  considered  along  with  the
            turned  up  an  abnormality.                                                           ease. But each of us carries  person's  other  medical  in-
            It appeared in a gene that,                                                            many  variants,  and  most  formation, but not used as
            when  it  fails  to  work  prop-                                                       are  harmless.  You  can't  the sole reason for a major
            erly,  causes  heart  defects,                                                         tell their effect just by look-  decision like breast remov-
            mental  disability  and  oth-                                                          ing  at  them.  And  just  be-  al.
            er  problems.  But  nobody                                                             cause a variant is rare, that  That message has not got-
            knew  whether  the  specific   Kendra Snyder, right, talks with patrons at Checkers Bar & Grill in   doesn't mean it's harmful.  ten  through  to  some  doc-
            abnormality  detected  by    Mount Union, Pa., on Monday, July 16, 2018.               Scientists do have ways to  tors,  said  Dr.  Allison  Kurian
            the  test  would  cause  trou-                                        Associated Press   determine if a variant is risky  of  Stanford  University.  She
            ble.                                                                                   or not, but they often don't  recently surveyed surgeons
            "I  was  pretty  distraught,"  ed  DNA  tests  being  mar-  many  thousands  of  them  have  enough  information  about  tests  that  examined
            says Burns, a photographer  keted  by  American  labs  are  being  reported  to  pa-   to  make  the  call.  That's  the  BRCA1  and  BRCA2
            in  Charlotte,  North  Caro-  to  health  care  providers,  tients,  said  Heidi  Rehm  of  what  happened  to  Katie  genes, in which certain mu-
            lina.  "I  had  a  baby  who  mostly for single-gene disor-  Boston's   Massachusetts  Burns.                       tations can greatly increase
            was  kicking.  I  could  feel  ders, with the total growing  General  Hospital  and  the  She  had  the  genetic  test  the  risk  of  breast  cancer.
            him  moving  inside  of  me.  rapidly.  And  this  year,  the  Broad  Institute  in  Cam-  done  because  of  an  un-  Many surgeons said they'd
            But at the same time I had  Pennsylvania-based  Geis-     bridge, Massachusetts.       usual  finding  on  a  fetal  treat  a  patient  with  a  VUS
            this ache in my chest. What  inger health system began  The  rates  vary  by  disease.  ultrasound  scan.  The  VUS  the same way as if she had
            was his life going to be for  offering  free  genetic  test-  In seeking genes to explain  prompted   her   genetic  a  known  disease-promot-
            him?"                        ing to its patients as a stan-  a patient's hearing loss, for  counselor  to  suggest  test-  ing mutation.
            It  took  two  months  to  get  dard part of its disease pre-  example,  around  half  of  ing  both  her  and  her  hus-  "That  is  not  a  correct  rec-
            more  reliable  information,  vention  efforts,  along  with  tests will find only a VUS, she  band to see if they had the  ommendation," Kurian said.
            and  Burns  says  she  wasn't  things  like  mammograms  said. A child with symptoms  variant. The counselor also  "Those two things are differ-
            really  sure  of  the  answer  and cholesterol checks.    that  suggest  developmen-   brought up the possibility of  ent.  ...  We  need  to  have
            until after she gave birth in  Americans  are  interested  tal  delay  or  a  related  dis-  an abortion.           expert  genetic  counseling
            October to a healthy boy.    in  what  their  genes  say  order might get a test that  "Termination  was  off  the  more  closely  integrated
            Her experience is a glimpse  about  their  health.  Poll  re-  examines  200  genes,  she  table," Burns said.      into the care of breast can-
            into  a  surprising  paradox  sults  released  Thursday  by  said. With such a wide net  Instead,  Burns  scoured  the  cer patients."
            of   modern-day     genet-   The Associated Press-NORC  cast, the chances of a VUS  internet.  In  a  searchable  Kendra  Snyder,  of  Newton
            ics:  Scientists  have  made  Center for Public Affairs Re-  are nearly 100 percent, she  database  of  genetic  vari-  Hamilton, Pennsylvania, re-
            huge  leaps  in  rapidly  de-  search  found  that  60  per-  said.                    ants called Clinvar, she saw  calls being told by her ge-
            coding  people's  DNA,  but  cent would want to know if  That can cause more than  that Rehm's laboratory had  netic counselor "just to live
            they sometimes don't know  they carried a variant asso-   worry,  said  Otis  Brawley,  encountered  the  variant  your  normal  life"  after  VUS
            what  their  findings  mean.  ciated with even an incur-  chief medical and scientif-  found in her fetus, and clas-  results  this  year.  She  had
            They can even get fooled.    able disease.                ic officer for the American  sified it as a VUS.          taken  the  test  because  of
            That can come to a head  But DNA test results can be  Cancer Society. He tells of  Burns  contacted  Rehm,  a heart condition.
            when  medical  profession-   puzzling.  Katie  Burns'  fetus  women who got breasts re-  who  provided  some  reas-  "I  was  a  little  upset,"  she
            als have people tested for  had  what  experts  call  a  moved  after  learning  they  surance. In the years since  said. "I was hoping I'd have
            genetic variants that cause  "variant  of  uncertain  sig-  had a VUS in a gene linked  the   2013   classification  more  conclusive  answers
            or promote a disease, usu-   nificance," or a VUS. Many  to breast cancer — only to  as  VUS,  the  variant  had  as  to  why  my  heart  is  like
            ally  because  they  show  are  known:  One  standard  learn years later that further  turned  up  in  three  mem-  this."
            symptoms or an illness runs  database  contains  almost  research  showed  the  vari-  bers of the general public,  But  upon  reflection,  she
            in  their  family.  The  testing  193,000  variants  catego-  ants were harmless.      and  Rehm  told  Burns  she  said,   she   realized   she
            often  focuses  on  relatively  rized  as  a  VUS,  more  than  How can this be? How can  suspected  that  either  she  shouldn't  stress  over  it,  be-
            rare disorders, caused by a  twice  the  number  of  listed  scientists not know whether  or  her  husband  would  be  cause  doing  so  would  re-
            single gene.                 variants  known  to  cause  a DNA abnormality is dan-     found to have the variant.  duce  her  quality  of  life.
            Medicine is getting into ge-  disease.                    gerous?                      That would give further evi-  As  for  the  VUS  finding,
            netic  testing  in  a  big  way.  Each variant may be seen  To understand that, it helps  dence that it's harmless.  "it's  there,  but  I'm  not  re-
            One recent estimate found  in only one or a handful of  to know a bit about DNA.       When  Burns  later  learned  ally panicking and thinking
            nearly  75,000  health-relat-  patients.  But  as  a  group,  In  each  of  us,  the  genetic  that the variant appeared  much about it."q
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