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Live-Cell Analysis Handbook — Third Edition


       While traditional compact microscopes typically only image from   The real-time live-cell analysis approach also provides the
       a single micro-plate or flask at a time, new live-cell analysis   opportunity to make data driven decisions while the experiment
       devices such as IncuCyte can automatically capture and analyze   is in progress. A researcher studying the biology of vascular
       images from multiple micro-plates in parallel, thereby significantly   or neuronal networks, for example, may wish to first establish
       increasing throughput (e.g. IncuCyte  = 6 x 384 well plates).  With   a stable network before assessing the effects of compound
       the IncuCyte® system, a unique moving optical path design means   treatments or genetic manipulations (e.g. siRNAs). With
       that the cells and cell plates remain stationary throughout the   continuous live-cell analysis, it is straightforward to temporally
       entire experiment. This further minimizes cell perturbance and   track network parameters and use the real time data to judge
       enables imaging and analyses of both adherent and non-adherent   when best to initiate the treatment regimes. The timing of
       cell types.                                            adjunct studies such as analysis of metabolites or secreted
                                                              proteins in supernatants can also be guided. Drug washout
       This combination of functionality, throughput and ease of use   studies may be performed using the real time data to identify
       revolutionizes the way researchers can think about imaging   when an equilibrium response occurs and to trigger the timing
       assays in living cells. Real time live-cell analysis has now been   of the washout regime. If for any reason it transpires that the
       applied to a wide range of phenotypic cellular assays including   experiment is not performing as expected then treatments
       cell proliferation, cell death and apoptosis, immune-cell killing,   could be withheld to save expensive reagents and follow-on
       migration, chemotaxis, angiogenesis, neurite outgrowth and   experiments can be initiated more quickly to make up time.
       phagocytosis. In each case, the full time-course data and ‘mini-
       movies’ of the assay provide greater biological insight than end   Real-time live-cell analysis is extremely helpful when developing,
       point assays. Novel analyses such as area under curve, time to   validating and troubleshooting phenotypic assays. Within a small
       signal onset or threshold, and rate parameters (dx/dt) are at times   number of assay plates it’s usually possible to obtain a clear
       highly value adding. Simply calculating the assay signal at its peak   understanding of the relationship over time between assay signal
       timepoint and/or at the optimal signal/background all helps in   and treatments, cell plating densities, plate coatings and other
       assembling robust and reproducible assays. Of course, transient   protocol parameters. Scrutiny of the kinetic data and ‘mini-movies’
       effects of treatments can be detected by kinetic imaging that   from each well help to rapidly pinpoint sources of within- and
       may otherwise be missed with end-point reads.          across-plate variance and to validate the biology of interest.
                                                              This is particularly true for more advanced cell systems such as
       Due to its non-invasive nature, measurements from cells can be   co-cultures where far more permutations and combinations of
       made not only during the assay itself but also during the cell   protocol parameters exist (e.g. cell plating ratios) and the biology is
       preparation and ‘pre-assay’ stage. For example, the morphology   more complex.
       and proliferation rates of cells can be monitored throughout the
       cell culture period and immediately post-seeding on the micro-  In summary, real-time live-cell analysis is re-defining the
       titer assay plate. The parameter/phenotype of interest can be   possibilities and workflows of cell biology. The combination of
       measured prior to the addition of treatments to provide a within   ease of use, throughput, long term stability and non-invasive
       well baseline measure.  Quality control of cells and assay plates   measurement enables researchers to monitor and measure
       in this way helps improve assay performance and consistency by   cell behaviors at a scale and in ways that were previously not
       ensuring that experiments are only conducted on healthy, evenly   possible, or at the least, highly impractical. In the following
       plated cultures with the expected cell morphology.     chapters of this handbook, we illustrate this with a range of
                                                              different application examples.






























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