Page 206 - The Manga Guide to Biochemistry
P. 206

Reciprocal of reaction                           To get Vmax, we simply set x to 0,
   rate (pMol/hour)                              which leaves us with y = 1/Vmax. In
                                                 other words, we find where the
                                                  graph crosses the y-axis, take

                                                   the reciprocal of that value,
                                                                    and get Vmax.

                              slope              Next up—Km. We already know
                                                     that the slope is Km/Vmax,
- so we can simply solve the
                                                                                                                   linear equation for x when

                                                 y = 0 and get x = -1/Km. Then we
                                                 just multiply by -1, take

                                                 the reciprocal, and

                                                 we’ve got Km!

                        Reciprocal of substrate

                        concentration (µM)

I get it. It’s just a little  So in our example,                   We did it! Vmax
 bit of substitution and        when y is 0, x is                  and Km were
a little bit of algebra!            about -0.15.
                                                                      no match
            Kid’s stuff!                      This means that, in       for us!
                                              this reaction, the

                                                Km value of DNA
                                            polymerase is 1/0.15,

                                              or about 6.67 µM.

The Lineweaver-Burk reciprocal              Let’s see if I can remember...
     plot is used frequently in             First, I take the reciprocals
    enzyme research. Once you                of the reaction values, and

 understand these basic steps,                 then I plot them to get a
   you’re well on your way to                              straight line.
   becoming a great scientist!
                                            Then with a little bit
                                            of simple algebra,

                                               I can figure out
                                                    Vmax and Km.

                                            Lineweaver and Burk,
                                            eat your hearts out!

192 Chapter 4
   201   202   203   204   205   206   207   208   209   210   211