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CHAPTER 4  Drug Biotransformation     69


                    a single nucleotide polymorphism (SNP) within intron 3,  which   muscle relaxant may become susceptible to prolonged respiratory
                    enables normally spliced CYP3A5 transcripts in 5% of Caucasians,   paralysis (succinylcholine apnea). Similar pharmacogenetic differ-
                    29% of Japanese, 27% of Chinese, 30% of Koreans, and 73% of   ences are seen in the acetylation of isoniazid. The defect in slow
                    African Americans. Thus, it can significantly contribute to inter-  acetylators (of isoniazid and similar amines) appears to be caused by
                    individual differences in the metabolism of preferential CYP3A5   the synthesis of less of the NAT2 enzyme rather than of an abnor-
                    substrates such as midazolam. Two other CYP3A5 allelic variants   mal form of it. Inherited as an autosomal recessive trait, the slow
                    that result in a PM phenotype are also known.        acetylator phenotype occurs in about 50% of blacks and whites in
                       Polymorphisms in the CYP2A6 gene have also been recently   the USA, more frequently in Europeans living in high northern lati-
                    characterized, and their prevalence is apparently racially linked.   tudes, and much less commonly in Asians and Inuit (Eskimos). The
                    CYP2A6 is responsible for nicotine oxidation, and tobacco smok-  slow acetylator phenotype is also associated with a higher incidence
                    ers with low CYP2A6 activity consume less and have a lower inci-  of isoniazid-induced peripheral neuritis, drug-induced autoimmune
                    dence of lung cancer. CYP2A6 1B allelic variants associated with   disorders, and bicyclic aromatic amine-induced bladder cancer.
                    faster rates of nicotine metabolism have been recently discovered.   A  clinically  important  polymorphism  of  the  TPMT (thio-
                    It  remains  to  be  determined  whether  patients  with  these  faster   purine  S-methyltransferase) gene is encountered in Europeans
                    variants will fall into the converse paradigm of increased smoking   (frequency, 1:300), resulting in a rapidly degraded mutant enzyme
                    behavior and lung cancer incidence.                  and consequently deficient S-methylation of aromatic and hetero-
                       Additional genetic polymorphisms in drug metabolism are   cyclic sulfhydryl compounds including the anti-cancer thiopurine
                    being discovered. Of these, the gene for  CYP2B6 has become   drugs 6-mercaptopurine, thioguanine, and azathioprine, required
                    noteworthy as one of the most polymorphic P450 genes, with a   for their detoxification. Patients inheriting this polymorphism as
                    20- to 250-fold variation in interindividual CYP2B6 expression.   an autosomal recessive trait are at high risk of thiopurine drug-
                    Despite its low (1–5%) contribution to the total liver P450 con-  induced fatal hematopoietic toxicity.
                    tent, these CYP2B6 polymorphisms may have a significant impact   Genetic polymorphisms in the expression of other phase II
                    on the CYP2B6-dependent metabolism of several clinically rel-  enzymes (UGTs and GSTs) also occur. Thus, UGT polymorphisms
                    evant drugs such as cyclophosphamide, S-methadone, efavirenz,   (UGT1A1*28) are associated with hyperbilirubinemic diseases
                    nevirapine, bupropion, selegiline, and propofol. Of clinical rel-  (Gilbert’s syndrome) as well as toxic effects due to impaired drug
                    evance, women (particularly Hispanic-American women) express   conjugation and/or elimination (eg, the anticancer drug irinotecan).
                    considerably higher hepatic levels of CYP2B6 protein than men.  Similarly, genetic polymorphisms (GSTM1) in GST (mu1 isoform)
                       Studies of theophylline metabolism in monozygotic and dizy-  expression can lead to significant adverse effects and toxicities of
                    gotic twins that included pedigree analysis of various families have   drugs dependent on its GSH conjugation for elimination.
                    revealed that a distinct polymorphism may exist for this drug and
                    may be inherited as a recessive genetic trait. Genetic drug metabo-  C.  Role of Pharmacogenomic Testing in Clinically Safe &
                    lism polymorphisms also appear to occur for aminopyrine and car-  Effective Drug Therapy
                    bocysteine oxidations. Regularly updated information on human   Despite our improved understanding of the molecular basis of
                    P450 polymorphisms is available at http://www.cypalleles.ki.se/.  pharmacogenetic  defects  in  drug-metabolizing enzymes,  their
                       Although genetic polymorphisms in drug oxidations often   impact on drug therapy and ADRs, and the availability of vali-
                    involve specific P450 enzymes, such genetic variations can also   dated pharmacogenetic biomarkers to identify patients at risk, this
                    occur  in other enzymes. Recently, genetic polymorphisms in   clinically relevant information has not been effectively translated
                    POR, the essential P450 electron donor, have been reported. In   to patient care. Thus, the much-heralded potential for personalized
                    particular, an allelic variant (at a 28% frequency) encoding a POR   medicine, except in a few instances of drugs with a relatively low
                    A503V mutation has been reported to result in impaired CYP17-  therapeutic index (eg, warfarin), has remained largely unrealized.
                    dependent sex steroid synthesis and impaired CYP3A4- and   This is so even though 98% of US physicians are apparently aware
                    CYP2D6-dependent drug metabolism in vitro. Its involvement in   that such genetic information may significantly influence therapy.
                    clinically relevant drug metabolism, while predictable, remains to   This is partly due to the lack of adequate training in translating this
                    be established. Descriptions of a polymorphism in the oxidation    knowledge to medical practice, and partly due to the logistics of
                    of trimethylamine, believed to be metabolized largely by the   genetic testing and the issue of cost-effectiveness. Severe ADRs are
                    flavin monooxygenase  (Ziegler’s  enzyme), result in the “fish-  known to contribute to 100,000 annual US deaths, about 7% of
                    odor syndrome” in slow metabolizers, thus suggesting that genetic   all hospital admissions, and an increased average length of hospital
                    variants of other non-P450-dependent oxidative  enzymes  may   stay. Genotype information could greatly enhance safe and effica-
                    also contribute to such polymorphisms.               cious clinical therapy through dose adjustment or alternative drug
                                                                         therapy, thereby curbing much of the rising ADR incidence and its
                    B.  Phase II Enzyme Polymorphisms                    associated costs. (See Chapter 5 for further discussion.)
                    Succinylcholine is metabolized only half as rapidly in persons with
                    genetically determined deficiency in pseudocholinesterase (now   Commensal Gut Microbiota
                    generally referred to as butyrylcholinesterase [BCHE]) as in persons
                    with normally functioning enzyme. Different mutations, inherited   It is increasingly recognized that the human gut microbiome
                    as autosomal recessive traits, account for the enzyme deficiency.   can also significantly influence drug responses. It thus serves as
                    Deficient  individuals  treated  with  succinylcholine  as  a  surgical   another relevant source of therapeutic misadventures and adverse
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