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          Therefore, when PPMV-1 is suspected, it is advisable to use both   tested by the F gene RRT-PCR assay. The F-gene based assay was
          cell culture and ECE.                                 developed specifically to detect virulent NDV from field swabs
                                                                during the 2002 ND outbreak in the USA (Wise et al., 2004b).
                                                                Although the assay can identify a wide range of isolates from
          Virus characterization                                different parts of the world, it fails to identify some PPMV-1 iso-
          The HI test is commonly used to identify NDV. In addition,   lates (Kim et al., 2008). These results suggest that because NDV
          panels of monoclonal antibodies can be used to characterize   isolates show considerable variation in the nt sequence around
          and group isolates (Alexander et al., 1987; Lana et al., 1988).   the F protein cleavage site, the designed F gene probe may not
          Although  monoclonal  antibodies are very helpful in diagnosis   recognize all NDV isolates.
          of NDV, their ability to detect a broad range of NDV isolates is   Both OIE and USDA define an APMV-1 isolate virulent (noti-
          often limited. Other serological tests, such as ELISA (Snyder et   fiable disease), if the isolate has an ICPI value equal to or greater
          al., 1984; Adair et al., 1989), virus neutralization assay in chicken   than 0.7 and/or presence of at least three basic aa (arginine or
          embryos (Beard, 1980) and plaque neutralization test (Beard and   lysine) between residue positions 113 and 116 of the C-terminus
          Hanson, 1984) are available, but they have limited value in assess-  of the F2 protein and a phenylalanine at position 117, which is the
          ing the pathogenicity of the isolate. Historically, three in vivo tests   N-terminus of the F1 protein.
          have been used to determine the pathogenicity of NDV isolates:
          (1) mean death time (MDT) in ECE, (2) ICPI test and (3)
          intravenous pathogenicity index (IVPI) test (Alexander, 2009).   Immune response to NDV
          The MDT is the mean time in hours for the minimum lethal   The immune response to NDV varies depending on the infecting
          dose to kill chicken embryos. The MDT has been used to clas-  strain and the host species. NDV infections caused by lentogenic
          sify NDV isolates as velogenic (taking less than 60 hours to kill),   or mesogenic strains are usually resolved by host innate and adap-
          mesogenic (taking between 60 to 90 hours to kill), and lentogenic   tive immunity. But in the case of velogenic strains, the virus might
          (taking more than 90 hours to kill). The ICPI test is performed by   simply outrace host defence and quickly overwhelm the host
          inoculating 0.05 ml of a 1:10 dilution of fresh infectious allantoic   leading to death. NDV is a highly infectious and a fast-replicative
          fluid into the brain of each of 10 1-day-old chicks. The birds are   virus. Therefore, both strong innate and strong adaptive immune
          observed daily for 8 days. At each observation, a bird is scored 0   responses are needed for complete protection against NDV infec-
          if normal, 1 if sick and 2 if dead. The ICPI value is the mean score   tion.
          per bird per observation. The velogenic viruses give indices that   The host innate immune response is the immediate reaction
          approach the maximum score of 2.0; whereas, lentogenic viruses   to NDV infection, which is aimed at resisting virus growth and
          give values close to 0.0. IVPI is a weighted score of clinical signs   aiding the host to develop specific protection from the adaptive
          after intravenous injection of the virus into 10 six-week-old chick-  immune response. The innate immunity is critical in the early
          ens. Lentogenic and some mesogenic strains have IVPI values   period of infection. NDV enters the host through the respiratory
          of 0.0; whereas, the indices for velogenic viruses approach the   tract where it first encounters extracellular innate defence barriers,
          maximum score of 3.0. Of the three tests, ICPI is internationally   which can inactivate the virus particles and signal for recruitment
          used for determining the virulence of NDV isolates, because of its   of immune cells. Among various extracellular defence barriers,
          sensitivity and reliability (Alexander, 1988). However, the ICPI   complement (C′) is a powerful system of host early innate immune
          test may not reflect the true pathogenicity of viruses isolated from   response. It has been shown that NDV can be inactivated by C′ in
          species other than chickens. For example, some PPMV-1 isolates   the absence of antiviral antibody (Welsh, 1977). It has also been
          have ICPI values of mesogenic strains but have MDT values of   shown that NDV can activate all three C′ pathways (Biswas et al.,
          lentogenic strains (Pearson et al., 1987). Therefore, the patho-  2012). NDV was found to passively incorporate host cell regula-
          genicity of a non-chicken NDV isolate for chickens should be   tors of complement activation (RCA) proteins CD46 and CD55
          determined by experimental infection of chickens using natural   at levels that could provide virus protection against C′-mediated
          routes of infection.                                  neutralization. It was also shown that NDV grown in ECE were
            The  conventional  pathogenicity  tests  are  time  consuming   not neutralized by non-immune chicken serum but were neutral-
          and expensive; hence, several rapid pathotyping methods such   ized by normal human serum, confirming that RCAs function in
          as reverse transcription (RT)-PCR and sequencing of the F   a species-specific manner (Biswas et al., 2012).
          protein cleavage site have been developed (Miller et al., 2010).   Studies have shown that pro-inflammatory cytokines,
          Of  these  assays,  the  real-time  RT-PCR  (RRT-PCR)  offers  the   chemokines, type I and type II IFNs, and antiviral proteins deter-
          highest sensitivity. Several RRT-PCR assays have been developed   mine the early host innate immune response to NDV infection
          in the last decade around the world to detect viruses circulating   (Ecco et al., 2011; Rue et al., 2011). For example, IL-6, MDA-5,
          in their locations (Miller et al., 2010). In the USA, two different   and IFIT-5 in the spleen of infected chickens have been shown to
          RRT-PCR assays have been extensively used (Wise et al., 2004b).   be induced by a virulent NDV strain at 1-day post infection (Rue
          An M-gene based assay was developed for the detection of NDV   et al., 2011). Further studies have shown that chickens infected
          isolates (Kim et al., 2007a,b). However, due to sequence variation   with  different velogenic  genotypes  induced different viral load
          of the M gene, some NDV isolates are not detected by this assay.   and different levels of cytokines and chemokines associated with
          Therefore, samples testing positive by the M gene are subsequently   inflammatory reactions (Hu et al., 2012; Rasoli et al., 2014). NDV
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