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VSP 2018 Operations Manual



                                                   diagnostic yield. Rectal swabs are of little or no value in
                                                   viral detection. Specimens from at least 10 ill persons
                                                   should be collected to maximize the chance that a diagnosis
                                                   can be made. The diagnostic yield is low when specimens
                                                   from fewer than 10 persons are submitted.

                                                3. Store specimens at 4°C (40°F). Freezing may destroy the
                                                   characteristic viral morphology that permits a diagnosis by
                                                   electron microscopy.

                                                4. Take special care to prevent cross-CONTAMINATION of
                                                   specimens during collection and transport because new
                                                   amplification techniques are exquisitely sensitive.

                              13.4.5.3.2    Paired Serum Specimens for Viral Diagnosis
                                                1. Collect acute-period serum specimens during the first
                                                   5  days of symptoms. The convalescent-period serum
                                                   specimen should be collected during the third to sixth week
                                                   after illness.


                                                2. Collect 10 pairs from ill persons (the same persons
                                                   submitting stool specimens) and 10 pairs from well
                                                   persons. Serum specimens from adults should be 10 mL
                                                   and serum specimens from children should be 3 mL.

                                                3. Use storage tubes containing no anticoagulant (tubes with
                                                   red tops) for collection.

                                                4. If a centrifuge is available, centrifuge the specimen for
                                                   10  minutes and remove the serum using a pipette. If no
                                                   centrifuge is available, the blood specimens can sit in a
                                                   refrigerator until a clot has formed; remove the serum using
                                                   pipettes, as above.


                                                5. Place the serum into an empty nunc tube, label, then
                                                   refrigerate. Do not freeze.


                              13.4.5.3.3    Other Specimens for Viral Diagnosis
                                            Water, FOOD, and Environmental Samples
                                            Viruses causing AGE are not routinely detected in water or FOOD,
                                            but may be detectable on surfaces with environmental swabbing.
                                            Swabbing may be completed under the guidance of VSP staff or
                                            the CDC National Calicivirus Laboratory.

                                            Viruses have been successfully detected in vomitus specimens.
                                            These should be collected and sent using same methodology as for



                                Annex 13.4: Acute Gastroenteritis Outbreak Investigation; 181
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