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340  Susan C. Cork, Willy Schauwers and Roy Halliwell

            Chapter 3). Plasma levels of pepsinogen in rumi-  Principles of chemical reactions
            nants can also be used to assess the severity of
            abomasal damage.                         To understand the principles behind biochemical
                                                     tests it is necessary to have a basic knowledge
                                                     and understanding of chemical reactions. There
            7.6   General principles and             are a wide range of text books on the subject
                 methodology of basic                of biochemistry and it is a good idea to become
                 biochemical tests                   familiar with the periodic table of the elements
                                                     and the atomic weight of commonly used ele-
            Most automated biochemistry systems use   ments and compounds. Some useful texts are
            quantitative methodology to determine the exact   listed in the bibliography at end of this chapter.
            amount of a given substance in a sample. Manual   Basically, compounds and their constituents
            tests may also give quantitative results but to   (elements) are made up of atoms. Each atom is
            ensure reliability it is very important to follow   composed of neutral (neutrons), positive (pro-
            the  protocols exactly.  In  both  systems, clean   tons) and negative (electrons) subunits that
            glassware and good quality water are required.   determine the structure and reactivity of an
            For accurate chemical analytical work or when   element. An element is defined by its atomic
            using new glassware it is advisable to soak it   number, mass and position in the periodic
            in 2–5% (20 ml/l) hydrochloric acid (HCl) fol-  table (see Table 7.4), for example, carbon has
            lowed by washing and rinsing in two changes of   a nucleus containing six neutrons and six pro-
            tap water and three changes of de-ionized water   tons (Figure 7.10), an atomic number of six and
            (see Chapter 2) before use.              an atomic mass of (6 + 6) = 12. The number
              The  following  section  outlines  the  princi-  of electrons depends on the ‘charged state’ of
            ples behind common biochemical tests and the   the  element,  carbon  atoms  may  gain  or  lose
            practical aspects which need to be considered.   electrons depending on the compound that is
            Quantitative and semi-quantitative analysis is   formed. These characteristics determine how
            commonly done using either of the following   carbon atoms will behave in chemical reactions.
            methods:                                 The way in which elements combine to form
                                                     compounds, by the transfer or sharing of elec-
            1  volumetric analysis, in which a substance in   trons, is known as valency, for example:
              solution is measured by titration
                                                                          .
            2  colorimetric techniques, by which a sub-  Na  + C + H  + 3 O  = NaHCO (sodium
                                                                         2–
                                                                   +
                                                           +
                                                                                   3
              stance reacts with reagents to give a coloured   bicarbonate)
              product which is measured by an absorption   +   2–
              filter colorimeter/ spectrophotometer.    2H  + O = H O (water)
                                                                    2

                                                        Na  + Cl = NaCl (salt)
                                                           +
                                                                –
            The majority of modern routine biochemical
            assays  are based on chemical reactions that   In these examples carbon (C) has a valence
            produce coloured substances. Other methods,   of +4, hydrogen (H) and sodium (Na) have a
            including flame emission and liquid chromatog-  valence of +1, chlorine (Cl) has a valence of –1
            raphy will not be considered further here.  and oxygen (O) has a valance of –2.
                                                       Some elements have more than one valance,

                                                     for example iron (Fe  and Fe ). Elements are
                                                                             3+
                                                                     2+
                                                     composed of one type of atom but may combine



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