Page 204 - Veterinary Toxicology, Basic and Clinical Principles, 3rd Edition

Toxicoproteomics in Diagnostic Toxicology Chapter | 10 171

VetBooks.ir Ma, Y., Zhao, Y., Zhao, R., et al., 2010. Molecular diversity of toxic com- Stewart, I.I., Thomson, T., Figeys, D., 2001. 18O Labeling: a tool for
proteomics. Rapid Commun. Mass Spectrom. 15, 2456 2465.
ponents from scorpion Heterometrus petersii venom revealed by prote-
Sze, S.K., Ge, Y., Oh, H., et al., 2003. Plasma electron capture dissocia-
omic and transcriptome analysis. Proteomics. 10 (13), 2471 2485.
MacBeath, G., Schreiber, S.L., 2000. Printing proteins as microarrays for
spectrometry. Anal. Chem. 75 (7), 1599 1603.
high-throughput function determination. Science. 289, 1760 1763. tion for the characterization of large proteins by top down mass
Mahn, A., Asenjo, J.A., 2005. Prediction of protein interaction in hydro- U ¨ nlu ¨, M., Morgan, M.E., Minden, J.S., 1997. Difference gel electropho-
phobic interaction chromatography. Biotechnol. Adv. 23, 359 368. resis. A single gel method for detecting changes in protein extracts.
Mange, A., Chaurand, P., Perrochia, H., et al., 2009. Liquid Electrophoresis. 18 (11), 2071 2077.
chromatography-tandem and MALDI imaging mass spectrometry Utkin, Y.N., 2017. Modern trends in animal venom research omics
analysis of RCL2/CS100-fixed, paraffin-embedded tissues: proteo- and nanomaterials. World J. Biol. Chem. 8 (1), 4 12.
mics evaluation of an alternative fixative for biomarker discovery. J. Varo, I., Rigos, G., Navarro, J.C., et al., 2010. Effect of ivermectin on
Proteome Res. 8 (12), 5619 5628. the liver of gilthead sea bream Sparus aurata: a proteomic approach.
Merchant, M., Weinberger, S.R., 2000. Recent advancements in surface- Chemosphere. 80 (5), 570 577.
enhanced laser desorption/ionization-time of flight mass spectrome- Venkatraman, A., Landar, A., Davis, A.J., et al., 2004. Modification of
try. Electrophoresis. 21, 1164 1167. the mitochondrial proteome in response to the stress of ethanol-
Merchant, M.L., 2010. Mass spectrometry in chronic kidney disease dependent hepatotoxicity. J. Biol. Chem. 279 (21), 22092 22101.
research. Adv. Chronic Kidney Dis. 17 (6), 455 468. Vlahou, A., Fountoulakis, M., 2005. Proteomic approaches in the search
Mirzaei, H., Regnier, F., 2005. Structure specific chromatographic selec- for disease markers. J. Chromatogr. B. 814, 11 19.
tion in targeted proteomics. J. Chromatogr. B. 817, 23 34. Wang, M., Wang, Y., Zhang, L., et al., 2013. Quantitative proteomic
Mondal, K., Gupta, M.N., 2006. The affinity concept in bioseparation: analysis reveals the mode-of-action for chronic mercury hepatotoxic-
evolving paradigms and expanding range of applications. Biomed. ity to marine medaka (Oryzias melastigma). Aquat. Toxicol.
Eng. 23, 59 76. 130 131, 123 131.
Nielsen, U.B., Cardone, M.H., Sinskey, A.J., et al., 2003. Profiling Wetmore, B.A., Merrick, B.A., 2004. Toxicoproteomics: proteomics
receptor tyrosine kinase activation by using Ab microarrays. Proc. applied to toxicology and pathology. Toxicol. Pathol. 32, 619 624.
Natl. Acad. Sci. 100 (16), 9330 9335. Wilson, C.R., Regnier, F.E., Knapp, D.W., et al., 2008. Glycoproteomic
O’Connor, P.B., Pittman, J.L., Thomson, B.A., et al., 2006. A new hybrid profiling of serum peptides in canine lymphoma and transitional cell
electrospray Fourier transform mass spectrometer: design and perfor- carcinoma. Vet. Comp. Oncol. 6 (3), 171 181.
mance characteristics. Rapid Commun. Mass Spectrom. 20, 259 266. Wysocki, V.H., Resing, K.A., Zhang, Q., et al., 2005. Mass spectrometry
O’Farrell, P.H., 1975. High resolution two-dimensional electrophoresis of peptides and proteins. Methods. 35, 211 222.
of proteins. J. Biol. Chem. 250 (10), 4007 4021. Yates, J.R., Cociorva, D., Liao, L., et al., 2006. Performance of a linear
Ong, S., Pandey, A., 2001. An evaluation of the use of two-dimensional ion trap-orbitrap hybrid for peptide analysis. Anal. Chem. 78,
gel electrophoresis in proteomics. Biomed. Eng. 18, 195 205. 493 500.
Otani, M., Taniguchi, T., Sakai, A., et al., 2011. Phosphoproteome pro- Ye, X., Luke, B.T., Johann Jr., D.J., et al., 2010. Optimized method for
filing using a fluorescent phosphosensor dye in two-dimensional computing 18O/16O ratios of differentially stable-isotope labelled
polyacrylamide gel electrophoresis. Appl. Biochem. Biotechnol. 164 peptides in the context of postdigestion 18O exchange/labeling.
(6), 804 818. Anal. Chem. 82 (13), 5878 5886.
Perkins, D.N., Pappin, D.J., Creasy, D.M., et al., 1999. Probability-based Zhang, X., Fang, A., Riley, C.P., et al., 2010a. Multi-dimensional liquid
protein identification by searching sequence databases using mass chromatography in proteomics a review. Anal. Chem. Acta. 664
spectrometry data. Electrophoresis. 20, 3551 3567. (2), 101 113.
Plebani, M., 2005. Proteomics: the next revolution in laboratory medi- Zhang, H., Cui, W., Wen, J., et al., 2010b. Native electrospray and elec-
cine? Clin. Chim. Acta. 357, 113 122. tron capture dissociation in FTICR mass spectrometry provide top-
Qui, Y., Sousa, E.A., Hewick, R.M., et al., 2002. Acid-labile isotope-coded down sequencing of a protein complement in an intact protein
extractants: a class of reagents for quantitative mass spectrometric assembly. J. Am. Soc. Mass Spectrom. 21 (12), 1966 1968.
analysis of complex protein mixtures. Anal. Chem. 74, 4969 4979. Zhu, Q., Uttamchandani, M., Li, D., et al., 2003. Enzymatic profiling
Robertson, C., Beavis, R.C., 2004. Tandem: matching proteins with system in a small-molecule microarray. Organ. Lett. 5 (8),
mass spectra. Bioinformatics. 20, 1466 1467. 1257 1260.
Stauber, J., MacAleese, L., Franck, J., et al., 2010. On-tissue protein Zieske, L.R., 2006. A perspective on the use of iTRAQt reagent technol-
identification and imaging by MALDI-ion mobility mass spectrome- ogy for protein complex and profiling studies. J. Exp. Bot. 57 (7),
try. J. Am. Soc. Mass Spectrom. 21 (3), 338 347. 1501 1508.