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CHAPTER 8  Molecular Diagnostics  155


             “I have some idea on treatments but want to prioritize the best   and negative predictive values, is the need to understand carefully
           therapy.” It is not uncommon that the selection of the best treat-  the relevance of the patient populations used in manuscripts that
                                                                 describe assay performance. Assay performance is closely regulated
           ment for a cancer histology is unclear and often defaults to the
  VetBooks.ir  clinician’s preference (e.g., selection of a specific cytotoxic che-  in the human molecular diagnostics field (e.g., Clinical Laboratory
                                                                 Improvement Amendments [CLIA] laboratory certification), but
           motherapy for canine bladder carcinoma). A distinct PMED
           approach may provide assistance in known drug selection. The   such regulation is absent in the veterinary reference laboratory diag-
           theoretical value of selecting the best drug, based on intrinsic   nostic model. Therefore rigor and the requirement of transparency
           resistance and sensitivity signatures, may be effectively provided   appropriately become the responsibility of the diagnostic scientist
           through transcriptomic, proteomic, and cell-based PMED plat-  and must be demanded and understood by the attending clinician. 
           forms. The validation of these drug selection strategies will require
           prospective validation in specific cancers in which cohorts of indi-  Summary
           viduals may receive a PMED-described medication compared
           with clinician’s best choice. Such transcriptomic, proteomic, and   Molecular diagnostics is becoming more integrated into veteri-
           cell-based PMED platforms are less likely to identify specific driv-  nary medicine and at the same time becoming more affordable.
           ers of cancer biology and generate new options for therapy.  One important feature of such advanced diagnostics is that many
             An ever-growing array of tests designed to inform diagnostic   of these techniques save money for owners and eliminate the need
           and treatment decisions in the human clinic is available from   for invasive procedures for their pets. For example, sensitive meth-
           more than 100 academic and 50 commercial laboratories. These   ods for detecting lymphoma through a combination of cytology,
           tests range in scope from single genes to gene panels, exomes, and   flow cytometry, and PARR assays can mean that a diagnosis of
           even whole genomes. Indeed, the multiomic analysis of cancer   splenic lymphoma can be made without splenectomy. Detection
           (multiple modalities used in a single cancer) is now common and   of the c-kit mutation can guide therapy so that the most effica-
           has reulted in a need to display and share such multiomic data.   cious (and therefore cost-effective) drugs are used. More expensive
           In everyday clinical practice the cost is still prohibitive, and the   exploratory techniques, such as whole genome sequencing and
           expertise  and  infrastructure  required  to  bring  them  to  bear  on   proteomic analysis of tumors, will almost certainly lead to discov-
           patient care are also largely lacking. Finally, more comprehensive   ery of new testing that can further simplify diagnoses. Veterinar-
           data showing improvements in genomics-correlated clinical out-  ians are encouraged to participate in these developmental studies
           comes is needed to support the use of these tests.    when they can, by providing biologic materials and clinical data
                                                                 to researchers, because ultimately patients and their owners will
           The Path to PMED for Veterinary Cancer Patients       derive great benefit from current research.

           Although much work remains to be done to chart the genomic   References
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           It has been historically acceptable for one laboratory to describe     7.   Breen  M, Modiano JF: Evolutionarily conserved cytogenetic
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           for distinct laboratories performing the same assay to publish their   copy number aberrations in 150 canine non-Hodgkin lymphomas,
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           to come to the field of molecular diagnostics, and clinicians should     9.   Hedan B, Thomas R, Motsinger-Reif A, et al.: Molecular cytogenetic
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           assay and should not expect the performance of the assay to be the   for human histiocytic cancer identifies deletion of tumor suppres-
           same across laboratories. Further complicating the issue of assay   sor genes and highlights influence of genetic background on tumor
           performance, characterized by sensitivity, specificity, and positive   behavior, BMC Cancer 11:201–215, 2011.
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