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Kinetic Neurite Analysis  Assays






           Quantification and visualization of neurite
           outgrowth, disruption and cell health







           Introduction

           Neurite dynamics are central to the study of neuropathological   temporal insight, but require large cell numbers and are subject
           disorders, neuronal injury and regeneration, embryonic   to further artifacts caused by differences in cell plating or other
           development and neuronal differentiation. During these processes,   variable culture conditions.
           the integrity of neuronal networks is slowly altered, accompanied
           by changes in neurite outgrowth and disruption that may lead   Continuous real-time imaging and analysis offers a significant
           to impaired neuronal connectivity. Characterizing the dynamic   advantage over end-point assays in that it provides a more
           changes of neurites in vitro, and how they interact with other   physiologically relevant and dynamic approach to visualizing and
           cells or environmental stimuli, can be invaluable for optimizing   analyzing neurite outgrowth and disruption. It is achieved using
           in vitro models, identifying diseased cells from a heterogeneous   non-destructive, cell-sparing, repeated measurements of the same
           population, studying phenotypic effects from genetic   neuronal networks over extended periods of time (days or weeks),
           manipulation, or performing drug pharmacology studies.   without perturbing cell health or delicate neurite structures.
                                                                  Conducting experiments at these time scales offers a significant
           Traditional in vitro approaches for analyzing neuronal structures   advantage when investigating chronic toxicity, as toxic effects
           rely on endpoint assays and imaging techniques that require   develop unpredictably over time.
           immunochemical staining. Neuronal cultures are exposed to
           a treatment condition, fixed and stained at a pre-determined   In this chapter we will examine kinetic approaches for measuring
           time post-treatment, and then imaged using either high content   changes in neurite outgrowth or disruption in both mono- and
           imaging or traditional fluorescent microscopes. Images are then   co-culture cell models. Cultures can be measured and visually
           analyzed to generate measurements of neurite length and branch   validated for days, weeks, or even months, and at microplate
           points. Although this method has been an important tool in   throughput, making these approaches particularly well-suited for
           neurobiology, the process is labor-intensive, perturbing to fragile   the optimization and analysis of neuronal cell models as well as
           neurites, and produces only a single time point of data. In sum,   for conducting pharmacological studies and investigations of drug
           the approach lacks temporal insight and is subject to artifact.   mechanisms of action.
           Concatenated endpoints may be utilized to address the lack of






























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