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Live-Cell Analysis Handbook — Third Edition


       Conclusions



       IncuCyte live-cell neurite analysis assays enable long-term   •    Assays are conducted in an optimal environment so that
       examination of neurite dynamics in primary, immortalized and iPSC-  neurite dynamics can be studied over extended time periods
       derived neuronal models. These assays are ideal for both optimizing   (days or weeks), ideal for studying effects that may not
       in vitro models and performing drug pharmacology studies.  By   present until later points in time. Cells do not experience loss
       acquiring images in a physiologically relevant environment, and   of environmental control or physical movement as data is
       using robust, integrated software analysis, neurite analysis can be   collected.
       extended from a traditional ‘fix-and-stain’ approach, to kinetic,
       non-invasive evaluation of mono- or co-culture models to detect   •    All data and time points can be verified by inspecting
       pharmacological and genetic manipulations that alter neurite   individual images and/or time-lapse movies. Observation of
       formation, elongation, and disruption.  This approach also allows   cell morphology provides additional validation and insight
       users to optimize the culture conditions and maintenance of   into the biological effect of treatment groups.
       iPSC-derived neuronal models as well as providing a method to
       analyze cell health by deploying longer wavelength, non-perturbing   •    Assays are either label-free or employ non-perturbing
       fluorophores. The IncuCyte approach for real-time, long-term   IncuCyte reagents that can be multiplexed (e.g. to readout
       quantitative analysis of neuronal morphology and cell health fills a   neurite length and cell death). Cell sparing, lab-tested
       critical need in the study of human neurophysiological disorders and   protocols are provided to minimize troubleshooting.
       iPSC-derived neurons.
                                                              •    Images are automatically acquired and analyzed in 96- or
       •    The assay is flexible and can be utilized to study neurite   384-well format using an intuitive user interface. This allows
         outgrowth or retraction in a wide range of cell types, from   for rapid assay optimization.
         large immortalized cell lines to primary neurons and iPSCs, in
         mono- or co-culture.                                 •    Low well-to-well variability and minimal user effort make the
                                                                assay amenable to medium throughput screening.
       •    Sensitive, kinetic measurements of neurite length,
         branch points, and cell body clusters capture a complete   •    The combination of long-term image-based analysis
         description of a highly dynamic process that cannot    and microplate throughput in a physiologically relevant
         be provided by single time point data alone. Arbitrarily   environment enables efficient optimization of culture
         defined endpoints are not required.                    conditions and maintenance of iPSC-derived neuronal models.



       References

       1.  Laissue P. et al. 2017. Assessing phototoxicity in live fluorescence
          imaging. Nature Methods; 14: 657–661.


       Representative IncuCyte Publications

       1.  Bressan RB, et al. Efficient CRISPR/Cas9-assisted gene targeting   6.  Li S, et al. Decoding the synaptic dysfunction of bioactive human
          enables rapid and precise genetic manipulation of mammalian   AD brain soluble Aβ to inspire novel therapeutic avenues for
          neural stem cells. Development, 2017, Feb 15; 144(4):635-648.  Alzheimer's disease. Acta Neuropathol Commun. 2018 Nov 8;6(1):121.

       2.  Cavaliere F, et al. In vitro a-synuclein neurotoxicity and spreading   7.  Muñoz SS, et al. The serine protease HtrA1 contributes to the
          among neurons and astrocytes using Lewy body extracts from   formation of an extracellular 25-kDa apolipoprotein E fragment
          Parkinson disease brains. Neurobiol Dis., 2017, Jul; 103:101-112.  that stimulates neuritogenesis. J Biol Chem., 2018, Mar 16;
                                                                 293(11):4071-4084.
       3.  Hong W, et al.  Diffusible, highly bioactive oligomers represent a
          critical minority of soluble Aβ in Alzheimer's disease brain. Acta   8.  Robinson M, Douglas S, and Michelle Willerth S. Mechanically stable
          Neuropathol., 2018, Jul; 136(1):19-40.                 fibrin scaffolds promote viability and induce neurite outgrowth in
                                                                 neural aggregates derived from human induced pluripotent stem
       4.  Jin, M, et al. An in vitro paradigm to assess potential anti-Aβ   cells. Sci Rep., 2017, Jul 24; 7(1):6250
          antibodies for Alzheimer’s disease. Nat Commun. 2018, Jul 11;
          9(1):2676.                                          9.  Vadodaria KC, et al. Altered serotonergic circuitry in SSRI-resistant
                                                                 major depressive disorder patient-derived neurons. Mol Psychiatry.
       5.  Kobayashi W, et al. Culture systems of dissociated mouse and   2019 Jun;24(6):808-818.
          human pluripotent stem cell-derived retinal ganglion cells
          purified by two-step immunopanning. Invest Ophthalmol Vis Sci.
          2018 Feb 1;59(2):776-787.

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