Page 102 - Avian Virology: Current Research and Future Trends

Figure 6
Avian Paramyxoviruses | 95

100 *APMV-21 strain Cheonsu/1510
100 APMV-9 strain New York
APMV-16 strain UPO216
99
100 APMV-1 strain LaSota
APMV-13 strain Shimane/67 Genus: Orthoavulavirus
100
100 APMV-12 strain Italy/3920-1
APMV-19 strain APV-C
APMV-18 strain APV-B
100
100 APMV-17 strain APV-A
APMV-4 strain Hong Kong
100 APMV-3 strain Netherlands Genus: Paraavulavirus
APMV-7 strain Tennessee
69 APMV-14 strain 11OG0352
100 APMV-5 strain Kunitachi
98
APMV-6 strain Hong Kong
41 APMV-11 strain France/100212 Genus: Metaavulavirus
APMV-15 strain RS-1177
99
APMV-10 strain Falkland Islands/324
100
50 APMV-2 strain Yucaipa
37 APMV-20 strain Kazakhstan/5976
41 APMV-8 strain Delaware
0.20

Figure 3.6 Phylogenetic analysis of APMVs based on RNA-dependent RNA polymerase or L protein sequences. The evolutionary history
was inferred based on the complete amino acid sequences of RNA-dependent RNA polymerase or L proteins of prototype strains of APMVs
by using the Maximum Likelihood method based on the JTT matrix-based model (Jones et al., 1992) in MEGA7 (Kumar et al., 2016). The
*
L protein sequences used were taken from the genome sequences as mentioned in the Fig. 3.8. Putative APMV serotype awaiting official
recognition from the ICTV.
Figure 7

100 *APMV-21 strain Cheonsu/1510
95 APMV-9 strain New York
APMV-16 strain UPO216
100
98 APMV-1 strain LaSota
APMV-13 strain Shimane/67
99
100 APMV-12 strain Italy/3920-1
APMV-19 strain APV-C
100 APMV-18 strain APV-B
95 APMV-17 strain APV-A
APMV-4 strain Hong Kong
99 APMV-3 strain Netherlands
100 APMV-11 strain France/100212
APMV-7 strain Tennessee
73 APMV-6 strain Hong Kong
100 99 APMV-5 strain Kunitachi
APMV-14 strain 11OG0352
56 APMV-15 strain RS-1177
APMV-10 strain Falkland Islands/324
100
APMV-8 strain Delaware
91
76 APMV-20 strain Kazakhstan/5976
87 APMV-2 strain Yucaipa

0.10

Figure 3.7 Phylogenetic analysis of APMVs based on F gene sequences. The evolutionary history was inferred based on the complete coding
sequences of fusion genes of prototype strains of APMVs by using the Maximum Likelihood method based on the Kimura 2-parameter
model (Kimura, 1980) in MEGA7 (Kumar et al., 2016). The F gene coding sequences used were taken from the genome sequences as
*
mentioned in Fig. 3.8. Putative APMV serotype awaiting official recognition from the ICTV. Note the striking similarities between the RdRp
based (Fig.3.6), and the F gene based phylogenetic trees in the cluster pattern of APMVs.