Page 106 - Avian Virology: Current Research and Future Trends

Avian Paramyxoviruses | 99

Table 3.4 Continued

APMV-11 APMV-12 APMV-13 APMV-14 APMV-15 APMV-16 APMV-17 APMV-18 APMV-19 APMV-20 APMV-21 c
43.9 55.1 54.8 44.7 44.7 65.8 52.0 51.7 51.8 43.9 58.3
1.053 0.701 0.716 1.024 1.012 0.463 0.786 0.788 0.781 1.043 0.632
49.6 45.0 44.6 48.8 56.6 45.5 46.0 45.1 44.5 56.8 44.7
0.846 0.996 1.017 0.867 0.643 0.990 0.988 1.015 1.014 0.652 1.027
42.1 42.6 42.4 42.7 42.9 42.2 42.6 42.8 42.7 42.9 42.3
1.144 1.112 1.116 1.122 1.103 1.117 1.114 1.097 1.093 1.100 1.130
42.7 42.5 42.5 42.7 42.9 42.8 43.1 43.0 43.1 42.8 42.3
1.107 1.107 1.094 1.107 1.093 1.100 1.076 1.088 1.067 1.090 1.107
48.1 44.2 43.8 51.4 48.5 44.1 44.3 44.1 43.8 48.2 43.1
0.896 1.028 1.057 0.797 0.885 1.045 1.059 1.053 1.067 0.893 1.102
45.8 42.6 43.5 49.5 46.4 42.8 43.0 42.5 42.8 45.7 42.4
0.987 1.106 1.088 0.863 0.953 1.097 1.090 1.112 1.091 0.974 1.124
49.4 44.2 44.4 48.2 49.1 44.5 44.6 43.4 43.4 49.1 43.1
0.863 1.029 1.032 0.900 0.867 1.023 1.006 1.069 1.052 0.870 1.085
49.5 44.7 44.7 49.5 56.7 45.3 45.2 44.4 44.3 56.6 44.3
0.852 1.000 1.016 0.835 0.664 0.989 1.002 1.030 1.044 0.658 1.044
43.6 53.3 53.0 44.0 44.3 58.0 50.9 50.7 50.9 44.8 64.3
1.054 0.730 0.738 1.019 1.022 0.620 0.796 0.794 0.799 1.008 0.493
49.9 44.6 44.0 49.4 58.1 44.8 44.6 44.5 44.0 57.9 43.5
0.841 1.016 1.042 0.859 0.617 1.002 1.021 1.032 1.051 0.638 1.074
* 44.1 43.3 48.2 49.7 44.1 44.5 43.8 43.7 49.0 42.7
1.044 1.083 0.904 0.848 1.026 1.031 1.062 1.074 0.873 1.107
* 62.2 44.9 44.9 55.0 51.9 51.5 51.2 44.8 53.3
0.532 1.001 1.011 0.703 0.790 0.799 0.807 1.013 0.742
* 44.9 44.9 55.4 51.6 50.9 51.6 44.2 52.5
1.024 1.012 0.692 0.788 0.812 0.794 1.035 0.764
* 49.4 45.0 45.2 45.0 44.3 49.1 43.9
0.856 1.005 1.003 1.018 1.046 0.867 1.058
* 45.3 46.1 44.7 44.9 55.8 43.2
0.989 0.975 1.027 1.004 0.677 1.088
* 52.1 51.9 52.2 44.8 58.3
0.776 0.783 0.775 0.995 0.632
* 65.2 60.1 45.3 51.0
0.474 0.579 1.001 0.806
* 60.4 44.5 51.5
0.568 1.045 0.794
* 43.9 51.6
1.048 0.788
* 43.6
1.070
*

a Green values indicate pairwise per cent nucleotide sequence identities calculated between genome sequences of APMV serotypes. See
phylogenetic tree (Fig. 3.8) for the GenBank accession numbers of the genome sequences used. The nucleotide per cent identity was calculated
using ClustalW alignment in MegAlign program of Lasergene software. Per cent identity values from 50.0 and above are underlined.
b Black values indicate pairwise evolutionary divergence estimates between genome sequences of APMV serotypes. The number of base
substitutions per site between sequences are shown. Standard error estimate(s) ranged from 0.007 to 0.025. Evolutionary analyses were
conducted using the Kimura 2-parameter model (Kimura, 1980) in MEGA7 (Kumar et al., 2016).
c Putative APMV serotype awaiting official recognition from the ICTV.