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104  |  Paldurai and Samal

          contains the preferred recognition site for furin (RX[K/R]R),   antigenic analysis showed that APMV-9 is more closely related
          which is an intracellular protease in most cells and tissues (basic   to APMV-1, -12, -14, and -21 than to other APMV serotypes.
          residues are underlined and the arrow indicates the cleavage site).   The MDT in embryonated chicken eggs was found to be more
          Hence, the F protein of virulent strains can be cleaved in most   than 120 hours indicating APMV-9 to be avirulent for chickens
          tissues, allowing the virulent strains to spread systemically. In   (Samuel et al., 2009).
          contrast, avirulent APMV-1 strains typically have mono or diba-  A comparison of F and HN sequences of four Italian APMV-9
          sic residues in the cleavage site ([G/E][K/R]Q[G/E]RL) and   isolates among themselves and with the prototype strain revealed
          depend on secretory protease. This restricts the avirulent virus   significant sequence variation suggesting the existence of differ-
          replication only to respiratory and enteric tracts, where the secre-  ent lineages among APMV-9 viruses (Dundon et al., 2010). There
          tory protease is found. All other APMV serotypes are avirulent   was 41 aa carboxyl-terminus extension of the HN protein in all
          to chickens, which is consistent with mono or dibasic residues   the Italian isolates resulting in a HN protein of 620 aa compared
          at their F protein cleavage site except APMV-5 (Fig. 3.5), which   with 579 aa for the prototype strain. The biological significance of
          is avirulent to chickens but contains a multibasic cleavage site   this extension is not known. A phylogenetic analysis of APMV-9
          (K-R-K-K-RF) in its F protein (Samuel et al., 2010). Therefore,   strains is shown in Fig. 3.11.
          the F protein cleavage site sequence may not be a diagnostic
          feature to determine the virulence of other APMV serotypes in   APMV-12
          chickens. However, the F protein cleavage site sequence is an   APMV-12 (AOAvV-12) was isolated from an apparently healthy
          important sequence for infectivity of the virus and is perfectly   Eurasian wigeon (A. penelope) trapped in 2005 in Rovigo prov-
          conserved in each APMV serotype, except APMV-1, APMV-2,   ince, northeastern Italy during AIV surveillance (Terregino et al.,
          APMV-3 and APMV-6. Each of these APMV serotypes have at   2013). The virus showed a low-level antigenic relationship only
          least two different F protein cleavage site sequences, indicating   to APMV-1 by HI test. The genome of APMV-12 is 15,132 nt
          that they may represent different subgroups. These results also   and contains six genes. The leader and trailer regions are 55 nt
          suggest that the F protein cleavage site sequence can be used as a   and 204 nt, respectively. The only strain APMV-12/wigeon/
          quick method to serotype an APMV isolate.             Italy/3920-1/05 (Italy/3920-1) is considered the prototype for
                                                                the APMV-12. APMV-12 has the closest nt identity (62.2%) with
                                                                APMV-13. The other closer nt identities (55.1 and 55%, respec-
          APMVs from genus Orthoavulavirus                      tively) are with APMV-1 and -16. The putative F protein cleavage
          The species AOAvV-1 is the type species for the genus Orthoavu-  site of strain Italy/3920-1 (G-R-E-P-RL) lacks multiple basic
          lavirus which encompasses all strains of APMV-1, including NDV   residues. The virus is avirulent to chickens based on ICPI values
          and pigeon paramyxovirus 1 (PPMV-1). For detailed information   (Terregino et al., 2013).
          on APMV-1, refer to Chapter 2 on Newcastle disease virus.
                                                                APMV-13
          APMV-9                                                Three novel APMVs were isolated during AIV surveillance in
          APMV-9 (AOAvV-9) was first isolated from a domestic duck   three separate regions of Eurasia: from a wild migratory goose
          (Anas platyrhynchos domesticus) during routine surveillance in   faeces sample collected in Japan in 2000 (Yamamoto et al., 2015),
          New York in 1978 (Sandhu and Hinshaw, 1981; Alexander et al.,   from a white-fronted goose in Kazakhstan in 2013 (Karamendin
          1983a). Since then APMV-9 strains have been isolated from feral   et al., 2016b), and from a white-fronted goose in Ukraine in
          ducks in Italy indicating worldwide distribution (Capua et al.,   2011 (Goraichuk et al., 2016). The F genes of all three strains
          2004; Dundon et al., 2010). Isolation of APMV-9 is less frequent   share > 97% nt identity and belong to APMV-13 (AOAvV-13)
          than some of the other APMV serotypes. APMV-9 does not cause   (Amarasinghe et al.,  2017).  The  APMV-13  strain  goose/Shi-
          clinical disease in birds. Strain domestic duck/New York/22/78   mane/67/2000 (Shimane/67) from Japan is the prototype strain
          is the prototype strain for the serotype.             and has the genome of 16,146 nt. The strain Shimane/67 grows in
            The full genome sequence of APMV-9 strain domestic duck/  most cell lines in the presence of exogenous protease and causes
          New York/22/78 has been published (Samuel et al., 2009). The   syncytia formation (Yamamoto et al., 2015). The aa sequence at
          genome of APMV-9 is 15,438 nt long and encodes six genes with   the F protein cleavage site of strain Shimane/67 is V-R-E-N-RL,
          intergenic regions of 0–30 nt. The genome contains a 55 nt leader   which resembles the motif of lentogenic NDV. The virus is aviru-
          sequence at the 3′ end and a 47 nt trailer sequence at the 5′ end.   lent to chickens based on the ICPI value. The virus showed some
          The cleavage site sequence of the F protein is R-I-R-E-G-RI,   cross-reaction by HI test with APMV-1, APMV-4 and APMV-7.
          which resembles the cleavage site sequence of lentogenic NDV.   Complete genome sequences are also available for the strains from
          Exogenous protease is required for in vitro virus replication. The   Kazakhstan and Ukraine (Goraichuk et al., 2016; Karamendin et
          virus grows only in a few established cell lines, such as Vero, DF-1   al., 2016b). The genome of Kazakhstan strain is 15,996 nt. How-
          and BHK-21. It is necessary to include 10% allantoic fluid for   ever, the genome of Ukraine strain is 16,146 nt, which is 150 nt
          replication of the virus in cell culture, which cannot be met by   longer than that of the Kazakhstan strain. The genome sequence
          chymotrypsin or by trypsin. The virus grew efficiently in primary   of Ukraine strain showed 97% nt identity to that of Kazakhstan
          CEK cells but not in CEF cells. The CPE observed was rounding,   strain. Phylogenetic analysis of the aa sequences showed that
          detachment of cells and no syncytia formation. Phylogenetic and   APMV-13 is most closely related to APMV-12.
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