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RESEARCH


        NEUROPHYSIOLOGY                                                          To identify candidates encoding such a proton
                                                                                channel, we compared the transcriptome of mouse
                                                                                                               2+
        An evolutionarily conserved gene                                        TRCs positive for the inward-conducting Zn -
                                                                                sensitive proton current (PKD2L1 cells) with that
                                                                                of TRCs that lack the current (TRPM5 cells; Fig. 1A).
        family encodes proton-selective                                         We selected genes that were enriched in PKD2L1
                                                                                cells and that encoded poorly characterized or
        ion channels                                                            uncharacterized transmembrane proteins (Fig. 1A
                                                                                and table S1) (see methods). We expressed the can-
                                                                                didates in human embryonic kidney 293 (HEK-293)
                    1
                                     1
                                                   1
                                                               1
        Yu-Hsiang Tu, Alexander J. Cooper, *† Bochuan Teng, * Rui B. Chang, *‡  cells or Xenopus oocytes and measured ionic cur-
        Daniel J. Artiga, Heather N. Turner, Eric M. Mulhall, § Wenlei Ye, ∥    rents in response to lowering the extracellular
                                                             1
                     1
                                                   1
                                     1
                                                                                                               +
                      2
        Andrew D. Smith, Emily R. Liman 1,3#                                    pH (pH o ) in the absence of extracellular Na .
                                                                                Of the 41 cDNAs tested, only Otopetrin1 (Otop1),
                                                                                which encodes a protein (OTOP1) with 12 pre-
        Ion channels form the basis for cellular electrical signaling. Despite the scores of  dicted transmembrane domains (12), generated
        genetically identified ion channels selective for other monatomic ions, only one type of  2+
                                                                                large Zn -sensitive inward currents in response
        proton-selective ion channel has been found in eukaryotic cells. By comparative
                                                                                to extracellular acidification (Fig. 1B).
        transcriptome analysis of mouse taste receptor cells, we identified Otopetrin1 (OTOP1), a
                                                                                 We characterized functional properties of OTOP1
        protein required for development of gravity-sensing otoconia in the vestibular system, as
                                                                                expressed in Xenopus oocytes. Unless otherwise
        forming a proton-selective ion channel. We found that murine OTOP1 is enriched in
                                                                                noted, the extracellular solution used in recordings
        acid-detecting taste receptor cells and is required for their zinc-sensitive proton conductance.
        Two related murine genes, Otop2 and Otop3,and a Drosophila ortholog also encode proton
        channels. Evolutionary conservation of the gene family and its widespread tissue distribution
        suggest a broad role for proton channels in physiology and pathophysiology.  1 Department of Biological Sciences, Section of
                                                                                Neurobiology, University of Southern California, Los  Downloaded from
                                                                                              2
                                                                                Angeles, CA 90089, USA. Department of Biological
           on channels include a large and diverse group  an essential step in the replication of the virus  Sciences, Section of Molecular and Computational Biology,
           of membrane proteins that rapidly, and with  (5). Theonlyproton-selectiveion channel iden-  University of Southern California, Los Angeles, CA 90089,
                                                                                   3
                                                                                USA. Bridge Institute, University of Southern California,
           great selectivity, move ions across the cell  tified in eukaryotes is the voltage-gated Hv1 (6–8),  Los Angeles, CA 90089, USA.
           membrane, performing crucial roles in cell  which is present in immune cells, where it extrudes  *These authors contributed equally to this work. †Present address:
        I signaling and homeostasis (1). Ion channels  protons into the phagosome to inactivate infec-  Zilkha Neurogenetic Institute, Department of Cell and Neuro-
        selective for each of the physiologically relevant  tiousagents(9). Functional evidence indicates that  biology, Keck School of Medicine, University of Southern California,
                                                                                Los Angeles, CA 90089, USA. ‡Present address: Department of
              +
                          –
                    2+
                +
        ions, Na ,K ,Ca ,and Cl , have been described  ion channels that selectively transport protons  Neuroscience and Department of Cellular and Molecular Physiol-
        at the molecular and structural levels (2, 3), but  into eukaryotic cells must also exist. For example,  ogy, Yale University School of Medicine, New Haven, CT 06520,  http://science.sciencemag.org/
        only a few types of proton-selective ion channels  in acid-sensing taste receptor cells (TRCs), an  USA. §Present address: Department of Neurobiology, Harvard
                                                           2+
        (proton channels) have been described (4). One  inward-conducting Zn -sensitive proton current  Medical School, Boston, MA 20115, USA. ||Present address:
                                                                                Department of Physiology, University of California, San Francisco,
        is the 96–amino acid M2 protein of influenza A,  that is biophysically distinct from currents carried  CA 94158, USA.
        which conducts protons into the virion interior,  by Hv1 has been described (10, 11).  #Corresponding author. Email: liman@usc.edu
        Fig. 1. Expression analysis of taste-cell–enriched genes         3
        identifies OTOP1 as a previously unknown proton channel.  4         ****       pH 4.5  OTOP1  I (A)  µ  1
        (A) Transcriptome profiling of PKD2L1 and TRPM5 taste  3                       10 Zn 2+                     on March 1, 2018
                                                                                                          80
        receptor cells (each data point represents the average of five  (RPM), PKD2L1 cells  2  2  -80 -40  -1  40 V (mV)
        replicates). Genes tested by electrophysiology are highlighted in  1  ΔI (-µA)              -2
        magenta or red (Otop1). RPM, reads per million. (B) Magnitude  0  1                500nA    -3
                                       +
        of currents evoked in response to pH 4.5 Na -free solution in                      10s
        Xenopus oocytes expressing the genes indicated (V m = –80 mV;  Log 10  -1  0
        data are mean ± SEM, n = 3 to 37 cells; for OTOP1, n = 5). ****P<  -1  0  1  2  3  4  Lrrc8c  Pebp4 Slc7a5  Tmc1  uninj
                                                                                                   Tmem163
                                                                                                      Tmem171
                                                                                      Slc22a15
                                                                                   Slc16a12
                                                                                           Slc38a11
                                                                                                 Tmem91
                                                                                                        9130409123Rik
                                                                                                         A630081J09Rik
                                                          Log (RPM),TRPM5 cells  Abcb10 Otop1 Izumo1 Ms4a15  Slc12a8 Slc22a5 Slc35d3 Slc38a3 Slc38a5 Slc39a14 Spaca1 Tmem47 Tmem117 Tmem164 Tmem252
        0.0001 compared to uninjected oocytes (n = 3). One-way analysis  10                            1700028J19Rik
        of variance with Bonferroni correction. (Inset) Currents evoked
        in an OTOP1-expressing oocyte in response to the acid stimulus at  oocyte      1          0
        V m = –80mV (left) and the current-voltage (I-V) relationship  pH 6  7.4  5.5  5  4.5           OTOP1 uninj
                                                                                  -80  V (mV)
        before application (gray), during acid application (green), and
                                                            -80 mV               7.4             I (-µA)  2
        during Zn 2+  application (black). (C) Current measured by two-          6.0   -1        Δ
                                                                                 5.5
        electrode voltage clamp in a Xenopus oocyte expressing OTOP1 in   I Δ    5.0              4
                   +
        response to Na -free extracellular solutions with pH o as indicated  1 µA  4.5  -2  I (µA)
        (V m = –80 mV). (D) I-V relation of the current in (A) from  30 s        4.0   -3           6    5    4
        voltage ramps (1 V/s). (E) Evoked current (DI; mean ± SEM) as a                                  pH
        function of pH in Xenopus oocytes expressing OTOP1 (blue circle;
                                                                HEK-293                0.5        0
        n = 4) and uninjected oocytes (gray circles; n =4). (F) Currents  pH  6 7.4  5.5  5  4.5
        measured by whole-cell patch clamp recording in a HEK-293                 -80 V (mV)           OTOP1  untrans
                           +
        cell expressing OTOP1 in Na -free extracellular solutions (pH i =7.3,  0.5 nA  7.4    80  I (-nA)  1
        V m = –80 mV). (G) I-V relation of currents in an OTOP1-expressing  5s   6.0   -0.5      Δ
        HEK-293 cell from experiments as in (G) with voltage ramps               5.5      I (nA)  2
        (1 V/s). (H) Evoked currents (DI; mean ± SEM) as a function of           5.0   -1
                                                                                                    6     5     4
        pH in HEK-293 cells expressing OTOP1 (blue squares; n =5)and                                     pH
        untransfected cells (gray squares; n =3).
        Tu et al., Science 359, 1047–1050 (2018)  2 March 2018                                              1of4
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