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20  2  Principles of Computed Tomography and Magnetic Resonance Imaging
            Table 2.2  Various body parts and typical window and level     process at variable rates. This results in a loss of transverse
            for their display                                 magnetization referred to as T2 decay [1, 3, 7]. The T2 time
                                                              is the time it takes for the transverse magnetization to decay
             Body part                    Window      Level   to 37% of its maximum value (Table 2.3). As the received
                                                              signal in the coil is related to transverse magnetization, the
             Head (soft tissue)            200          80    signal in the coil decays as relaxation occurs. The rate at
             Head (bone)                  2500         400    which T1 and T2 relaxation occurs varies between tissue
             Auditory apparatus (soft tissue)  50      250    types. The exploitation of this forms the basis for MR imag-
             Auditory apparatus (bone)    3000         500    ing and the superior contrast resolution.
             Brain                         200          30
             Lungs                        2000        −700    2.4.3  Magnetic Resonance Sequences
             Abdominal viscerae            300          40
                                                              Magnetic  resonance  images  are  generated  once  signal  is
            Source: Reference [4].                            detected by the receiver coil from excited protons, local-
                                                              ized, and displayed on the computer. Pulse sequences are
            nuclei is not perfectly equal, the NMV has its own discrete   utilized to take advantage of different relaxation rates of
            value. The interaction of this NMV with B o  is the basis of   tissues  (Figure  2.9).  There  are  two  main  groups  of
            MRI [1–3, 7].                                     sequences: spin echo and gradient echo sequences [9, 10].
              As stated previously, each hydrogen nucleus making up   The time it takes for the sequence to be run one time is the
            the NMV is spinning on its own axis. When influenced by   time to repetition (TR time).
            the main magnetic field, an additional spinning motion or   Different  sequences  are  useful  for  demonstration  of
            wobble  is  induced.  This  is  termed  precession  [1,  3,  7].   pathology. For example, T2* gradient echo sequences are
            Precession  occurs  at  a  specific  frequency  related  to  the   useful  for  evaluating  for  the  presence  of  hemorrhage
            magnet strength, termed the Larmor frequency. When pre-  (Figure 2.10). Regardless of the type of sequence chosen
            cessing hydrogen nuclei (protons) are exposed to an exter-  (spin echo or gradient), by varying parameters such as the
            nal  radiofrequency  (RF)  pulse  at  the  Larmor  frequency,   echo time (TE), repetition time (TR), and flip angle, images
            they will gain energy that is referred to as resonance [1, 3,   will be produced that are T1 weighted, T2 weighted, or pro-
            7]. The application of an RF pulse that causes resonance to   ton  density  (PD)  weighted  (Figure  2.11).  A  T1‐weighted
            occur is termed excitation [3, 7]. The absorption of energy   image (Figure 2.11a) depends on the difference in T1 times
            causes an increase in the number of spin down nuclei. This   between fat and water. The TR time controls T1 weighting.
            moves the NMV out of alignment and away from B o . The   T1‐weighted images must therefore have short TR times. In
            degree to which the NMV shifts away from B o  is termed the   a T2‐weighted image (Figure 2.11b), the contrast depends
            flip angle. With a flip angle of 90°, the nuclei have gained   on the difference in T2 time between fat and water. TE con-
            enough energy that the NMV is no longer in the longitudi-  trols the amount of T2 decay that is allowed before the sig-
            nal plane (B o ), but is now in the transverse plane. In addi-  nal is received. For T2 weighting, the TE time must be long.
            tion to the NMV being moved out of the longitudinal plane,   If both the T2 and T1 contrast are diminished, the image
            the individual protons will begin to process in phase with   will be PD weighted (Figure 2.11c). This requires both a
            each other [1, 3, 7].                             long TR to diminish T1 effects and a short TE to diminish
              Going back to Faraday’s law of induction, if a receiver coil   T2 effects (Table 2.4) [7, 10].
            is placed in the area of a moving magnetic field (resonating   There  are  several  other  sequences  such  as  inversion
            hydrogen protons), a signal will be induced. The magnitude   recovery (IR), fluid attenuated inversion recovery (FLAIR),
            of the signal produced will depend on the amount of mag-  and short time inversion recovery (STIR) that help improve
            netization  in  the  transverse  plane.  Once  the  RF  pulse  is   lesion conspicuity and confirm the type of tissue present
            withdrawn, the resonating protons will return to their origi-  [1,7]. For example, when evaluating bone with fatty mar-
            nal state of energy, giving up any excess energy gained and   row, lesions are difficult to identify because both the lesion
            returning to the longitudinal plane [3, 7]. The process of   and the fat will be hyperintense. By using a STIR sequence,
            giving up the gained energy is known as relaxation. When   the signal from fat can be suppressed, allowing only the
            the hydrogen nuclei give up their energy to the surrounding   pathology  to  be  visible  (Figure  2.11d)  [7]. The  inversion
            environment, also known as lattice, this is referred to as T1   times  (TI)  for  fat  and  water  are  different  and  this  can
            recovery [1, 3, 7]. The T1 time is the time it takes for 63% of   be utilized clinically. A FLAIR sequence will null signal
            the longitudinal magnetization to recover (Table 2.3). If the   from fluid‐filled structures, allowing lesions to be identi-
            nuclei  give  up  energy  to  neighboring  nuclei,  they  will   fied that may be adjacent to fluid. This is commonly used
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